DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Ea and TSPAN8

DIOPT Version :9

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_001356689.1 Gene:TSPAN8 / 7103 HGNCID:11855 Length:237 Species:Homo sapiens


Alignment Length:241 Identity:70/241 - (29%)
Similarity:117/241 - (48%) Gaps:32/241 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GIS-MVKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEALRTQQVPVT-------MIILG 60
            |:| .:||.:|.||.|..:||||::.    |...||..:|......::.|..:       :|.:|
Human     3 GVSACIKYSMFTFNFLFWLCGILILA----LAIWVRVSNDSQAIFGSEDVGSSSYVAVDILIAVG 63

  Fly    61 TIILLISWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYLEIMGDVVEKAWNHR 125
            .||:::.:.||||||:||.||.:.:.|.|.::::.|:|..|...|.|.|...|:.:.:.:  |.:
Human    64 AIIMILGFLGCCGAIKESRCMLLLFFIGLLLILLLQVATGILGAVFKSKSDRIVNETLYE--NTK 126

  Fly   126 ------TSRSDYMDAI---QISMKCCGR-SGYTDYAYQGKFPPSCCSDTNNCR------WETVYR 174
                  .|...:.:||   |...||||. :|..|:....:..|..|:..:..|      .:.||:
Human   127 LLSATGESEKQFQEAIIVFQEEFKCCGLVNGAADWGNNFQHYPELCACLDKQRPCQSYNGKQVYK 191

  Fly   175 RGCKVTFV-EFWDRNSDIIKYAGLVIAAIEFVGFVFACCLANSIRN 219
            ..| ::|: :|..:|..|:......:|.||.:|.||:..|...|.|
Human   192 ETC-ISFIKDFLAKNLIIVIGISFGLAVIEILGLVFSMVLYCQIGN 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspannin 8..217 CDD:278750 66/232 (28%)
tetraspanin_LEL 104..188 CDD:239401 23/100 (23%)
TSPAN8NP_001356689.1 Tetraspannin 8..230 CDD:334016 65/228 (29%)
TM4SF3_like_LEL 106..206 CDD:239407 23/102 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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