DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Ea and Tspan2

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_081809.2 Gene:Tspan2 / 70747 MGIID:1917997 Length:221 Species:Mus musculus


Alignment Length:237 Identity:60/237 - (25%)
Similarity:104/237 - (43%) Gaps:44/237 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GISMVKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDF-AEALRTQQVPVTMIIL---GTIIL 64
            |:..:||:|..||||..:.|..:|.|| |.|.....|.|. :|....:...|.:.:|   |.:::
Mouse     7 GLRCIKYLLLGFNLLFWLAGSAVIAFG-LWFRFGGTMKDLSSEDKSPEYFYVGLYVLVGAGALMM 70

  Fly    65 LISWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYLEIMGDVVEKAWNHRTSRS 129
            .:.:||||||:|||.|:..::...|.|:...::...::.::.||..:..:..:.|:|:      |
Mouse    71 TVGFFGCCGAMRESQCVLGSFFTCLLVIFAAEVTTGVFAFIGKDVAIRHVQSMYEEAY------S 129

  Fly   130 DYMD----------AIQISMKCCGRSGYTDYAYQGKFPPSCCSDT---NNC--RWETVYRRGCKV 179
            ||:.          ....:.:|||:..      ..:..|:|..:.   .||  :.|||.      
Mouse   130 DYLKDRARGNGTLITFHSAFQCCGKES------SEQVQPTCPKELPGHKNCIDKIETVI------ 182

  Fly   180 TFVEFWDRNSDIIKYAGLVIAAIEFVGFVFACCLANSIRNYR 221
                  .....:|...|:.||.:...|.:|:..|..:|||.|
Mouse   183 ------SAKLQLIGIVGIGIAGLTIFGMIFSMVLCCAIRNSR 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 55/225 (24%)
Tspan2NP_081809.2 Tetraspanin 11..212 CDD:459767 55/225 (24%)

Return to query results.
Submit another query.