DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and Tspan15

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_932113.2 Gene:Tspan15 / 70423 MGIID:1917673 Length:294 Species:Mus musculus


Alignment Length:244 Identity:51/244 - (20%)
Similarity:111/244 - (45%) Gaps:60/244 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEALRTQQ--------VP-VTMIILGTII 63
            :|:.|.|::.:..:.|.|::..|.           :|||.|.:.        .| :.:|:||.::
Mouse    20 LKFSLIIYSTVFWLIGGLVLSVGI-----------YAEAERQKYKTLESAFLAPAIILILLGVVM 73

  Fly    64 LLISWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYLEIMGDVVEKAWNHRTSR 128
            .::|:.|...::|::.|:..::..:|.:.::.:|...|...:.:::.::.:.|.:.:...:....
Mouse    74 FIVSFIGVLASLRDNLCLLQSFMYILGICLVMELIGGIVALIFRNQTIDFLNDNIRRGIENYYDD 138

  Fly   129 SDY---MDAIQISMKCCGRSGYTDYAYQGKF-------------PPSCC----SDTNN--CRWET 171
            .|:   ||.:|...||||...|.|:: :.::             |.:||    :|..|  |.::|
Mouse   139 LDFKNIMDFVQKKFKCCGGEDYRDWS-KNQYHDCSAPGPLACGVPYTCCIRNTTDVVNTMCGYKT 202

  Fly   172 -----------VYRRGC-KVTFVEFWDRNSDIIKYAGLVIAAI--EFVG 206
                       ::.||| ....:.|.| |..|:  |||::..:  :|:|
Mouse   203 IDKERLNAQNIIHVRGCTNAVLIWFMD-NYTIM--AGLLLGILLPQFLG 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 51/244 (21%)
Tspan15NP_932113.2 Tetraspanin 20..>157 CDD:459767 29/147 (20%)
penumbra_like_LEL 114..231 CDD:239411 23/118 (19%)

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