DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and Tspan11

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_081019.1 Gene:Tspan11 / 68498 MGIID:1915748 Length:253 Species:Mus musculus


Alignment Length:239 Identity:51/239 - (21%)
Similarity:95/239 - (39%) Gaps:37/239 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ISMVKYILFIFNLLCSICGILLIVFGA-LLFSKVRNMDDFAEALRTQQVPVTMIILGTIILLISW 68
            ::.:||:|||||....:.|..::..|. .|..|...:...|.:.......: :|.:|.:::...:
Mouse    13 LAHLKYLLFIFNFFFWVGGAAVMAVGIWTLVEKSGYLSILASSTFAASAYI-LIFVGGLVMTTGF 76

  Fly    69 FGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYLEIMGDVVEKAWNHRTSRSDY-- 131
            .|....|||......||..||.|:.:.:|...:...|    |.:.:.|  |..|:..::.:::  
Mouse    77 LGFGAIIREQKSCLSTYFCLLLVIFLVELVAGVLAHV----YYQRLSD--ELKWHLNSTLTEHYG 135

  Fly   132 ----------MDAIQISMKCCGRSGYTDYAYQG----------KFPPSCCSDT-----NNCRWET 171
                      :|.:|...||||.:...|:.:..          :.|.|||...     .......
Mouse   136 QPRAAEITASVDRLQQDFKCCGSNSSADWQHSAYILSQEALGRQVPDSCCKTVVARCGQRAHPSN 200

  Fly   172 VYR--RGCKVTFVEFWDRNSDIIKYAGLVIAAIEFVGFVFACCL 213
            :|:  .||.....:|...:..::...|:.:|.::..|.|..|||
Mouse   201 IYKVEGGCMAKLEQFVADHLLLMGAVGIGVACLQICGMVLTCCL 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 51/236 (22%)
Tspan11NP_081019.1 Tetraspanin 16..244 CDD:459767 49/234 (21%)
CD151_like_LEL 112..220 CDD:239408 20/113 (18%)

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