DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Ea and Tspan31

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_080258.1 Gene:Tspan31 / 67125 MGIID:1914375 Length:210 Species:Mus musculus


Alignment Length:227 Identity:51/227 - (22%)
Similarity:90/227 - (39%) Gaps:33/227 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSC-GISMVKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEALRTQQVPVTMIILGTIIL 64
            |.| |.:..:..|...|::..:.|.|||  |...:.|...:      :.:..:...:|.:|..:|
Mouse     1 MVCGGFACSRNALCALNVVYMLVGFLLI--GVAAWGKGLGV------VSSIHIIGGVIAVGVFLL 57

  Fly    65 LISWFGCCGAIRESYCMSMTYSILLFVLMIGQL-----ALVIYMWVQKDKYLEIMGDVVEKAWNH 124
            ||:..|..||......:...|.|:|.::.|.|.     .|.|....|        .||:..:|:.
Mouse    58 LIAVAGLVGAANHHQVLLFFYMIILGLVFIFQFGISCSCLAINRNTQ--------ADVINASWSV 114

  Fly   125 RTSRSDYMDAIQISMKCCGRSGYTDYAYQGKFPPSCCSDTNNCRWETVYRRGCKVTFVEFWDRNS 189
            .::.:.:  .::.|..|||....|....|   ..:.||..  |:.::...:.|...|::..|:..
Mouse   115 LSNSTRH--ELERSFDCCGLFNLTTLRLQ---DDTSCSAV--CKTKSSTCQMCGERFLKHSDKAL 172

  Fly   190 DIIKYAGLVIAAIEFVGFVFACCLANSIRNYR 221
            .|:...||..:..|.:|    ..||...||.:
Mouse   173 KILGGVGLFFSFTEILG----VWLAMRFRNQK 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 45/211 (21%)
Tspan31NP_080258.1 Tetraspanin 9..196 CDD:459767 46/213 (22%)

Return to query results.
Submit another query.