DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and Tspan1

DIOPT Version :9

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_598442.1 Gene:Tspan1 / 66805 MGIID:1914055 Length:240 Species:Mus musculus


Alignment Length:249 Identity:60/249 - (24%)
Similarity:111/249 - (44%) Gaps:50/249 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSCGISMVKYILFIFNLLCSICGILLI---------------VFGALLFSKVRNMDDFAEALRTQ 50
            |.| ...:|.::|:||||..:||..|:               |||:|..|          |::..
Mouse     1 MQC-FKFIKVMMFLFNLLIFLCGAALLAVGIWVSVDGTSFLKVFGSLSSS----------AMQFV 54

  Fly    51 QVPVTMIILGTIILLISWFGCCGAIRESYCMSMTYSILLFVLMIGQLA----LVIYMWVQKDKYL 111
            .|...:|..|.::.::.:.||.||..|:.|:.|.:..:|.::.|.::|    .::|..:.:....
Mouse    55 NVGYFLIAAGAVLFILGFLGCYGAHSENKCVLMMFFSILLIIFIAEIAGAVVALVYTTLAEQFLT 119

  Fly   112 EIMGDVVEKAWNHRTSRSDYMDAIQISMKCCGRSGYTD-----YAYQGK-FPPSCCSDTNN---- 166
            .::...:||.:.::|..:...:.....:.|||.:.|||     :..:.| |||.||::..|    
Mouse   120 LLVVPAIEKDYGYQTDFTQVWNTTMEELHCCGFNNYTDFNASRFVKENKVFPPPCCANPGNHTVE 184

  Fly   167 -CRWE---TVYRRGCKVTFVEFWDR-NSDIIKYAGLV--IAAIEFVGFVFACCL 213
             |..|   ::..:||   |.|...| .::.:...|:.  :||:|....|.:..|
Mouse   185 PCTEEKAKSMKVQGC---FKEILHRIRANAVTVGGVAVGVAALELAAMVVSMYL 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspannin 8..217 CDD:278750 58/242 (24%)
tetraspanin_LEL 104..188 CDD:239401 23/98 (23%)
Tspan1NP_598442.1 Tetraspannin 7..235 CDD:366035 57/240 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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