DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and Tspan13

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_079635.1 Gene:Tspan13 / 66109 MGIID:1913359 Length:204 Species:Mus musculus


Alignment Length:225 Identity:60/225 - (26%)
Similarity:87/225 - (38%) Gaps:63/225 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSC-GISMVKYILFIFNLLCSICGILLIVFGAL-----LFSKVRNMDDFAEALRTQQVPVTMIIL 59
            |.| |.|..|..|...|||.::..:|||...|.     |.|.:|             |...:|.:
Mouse     1 MVCGGFSCSKNCLCALNLLYTLVSLLLIGIAAWGIGFGLISSLR-------------VVGVVIAV 52

  Fly    60 GTIILLISWFGCCGAIRESYCMSMTYSILLFVLMIGQ-------LALVIYMWVQKDKYLEIMGDV 117
            |..:.||:..|..||::....:...|.|:|.::.|.|       |||          ..|..|.:
Mouse    53 GIFLFLIALVGLIGAVKHHQVLLFFYMIILLLVFIVQFSVSCACLAL----------NREQQGQL 107

  Fly   118 VEKAWNHRTS-RSDYMDAIQISMKCCGRSGYTDYAYQGKFPPSCCSDTNNCRWETVYRRGCKVTF 181
            :|..||:..| |:|    ||.::.||   |:..|......|.||...|..|       ..|    
Mouse   108 LEVGWNNTASARND----IQRNLNCC---GFRSYNPNDTCPASCAKSTQKC-------SSC---- 154

  Fly   182 VEFWDRNSDII-KYAGLVIAAIEFVGFVFA 210
                   :.|| :|||.|:..:..:|..|:
Mouse   155 -------APIIGEYAGEVLRFVGGIGLFFS 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 56/217 (26%)
Tspan13NP_079635.1 Tetraspanin <55..190 CDD:459767 41/158 (26%)

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