DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and prph2lb

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_001104664.1 Gene:prph2lb / 567873 ZFINID:ZDB-GENE-041001-147 Length:359 Species:Danio rerio


Alignment Length:288 Identity:61/288 - (21%)
Similarity:110/288 - (38%) Gaps:103/288 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEALRTQ--QVPVTMIILGTIILLISWFGCCG 73
            :|::.|.:..:.|:.|...|  ||.|| .::...|.:..:  .||..:|.:|.....|::.|  |
Zfish    19 VLWVLNWVSVVTGVTLFSMG--LFLKV-EIEKRRELMSKEIDSVPNMLICVGLTACAINFLG--G 78

  Fly    74 AIRESY-CMSMT----YSILL-----------FVLMIGQLALVIYMWVQKD-------------K 109
            .|  .| |:..|    :.:|:           |.:::|  ||:.|. ::||             :
Zfish    79 KI--CYDCVDTTKFLRWKLLMLPYITCTFFFTFCILVG--ALMCYS-MRKDLEESLYFGLRDAMR 138

  Fly   110 YLEIMGDVVEKAWNHRTSRSDYMDAIQISMKCCGRSGYTDYAY---------------------- 152
            |.:.. |:..:.:..||     ||.:|:..:|||..||.|:.:                      
Zfish   139 YYKDT-DMPGRCYIKRT-----MDMLQMQFQCCGNGGYRDWFHIQWISNRYLNLSNSDVVERIRS 197

  Fly   153 --QGKF-----PPSCCS------------DTNNCRWETVY--------RRGCKVTFVEFWDRNSD 190
              :||:     |.|||.            ..|:..:...|        ||||....:|.:   :.
Zfish   198 NVEGKYLIDGVPFSCCGLYSPRPCIQHQITNNSAHYNYDYLKEDLNLNRRGCLQALLEHY---TQ 259

  Fly   191 IIKYAGLVIAAIEFVGFVFACCLANSIR 218
            |::..||::..|    ::|...:...:|
Zfish   260 IMQSIGLIVLII----WLFEVSVLTGVR 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 60/283 (21%)
prph2lbNP_001104664.1 Tetraspanin 16..>166 CDD:459767 37/162 (23%)
peripherin_like_LEL 119..261 CDD:239415 29/151 (19%)

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