DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Ea and zgc:113223

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_001013569.1 Gene:zgc:113223 / 541424 ZFINID:ZDB-GENE-050320-127 Length:266 Species:Danio rerio


Alignment Length:257 Identity:65/257 - (25%)
Similarity:107/257 - (41%) Gaps:50/257 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKYILFIFNLLCSICGILLIVFGALL-----FSKVRNMDDFAEALRTQQVPVTMIILGTIILLIS 67
            |||.||       :|..:..||.|.|     ::|:....|..:.|..... :.:|::|:::..|:
Zfish    13 VKYTLF-------VCCYVFWVFSAGLIAVGIYAKIAKESDVVDTLMADPA-LLLIVVGSLMFTIT 69

  Fly    68 WFGCCGAIRE-SYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYLEIMGDVVEKA---WNHRTSR 128
            :.||.||:|. |..::|..:|||.||::...|.|:.: :..:|..|....::.||   :......
Zfish    70 FLGCFGALRNASLLLNMFVAILLVVLLLQVTAAVLGL-LFSEKVQERTEQLMMKAIVRYRDDQDL 133

  Fly   129 SDYMDAIQISMKCCGRSGYTDYAYQGKF--------------PPSCCSDTNN-------CRWET- 171
            .:.:|.:|...||||...|.|::....|              |.|||....|       |.:|| 
Zfish   134 ENVIDFVQKKFKCCGVDSYLDWSKNMYFNSSEHNPSLEAYGVPFSCCIRQKNETVFNSMCGYETQ 198

  Fly   172 ----------VYRRGCKVTFVEFWDRNSDIIKYAGLVIAAIEFVGFVFACCLANSIRNYRRR 223
                      :|..||....|.:..:|..::....||:..:|......|......|||.:||
Zfish   199 KMKKSLAGRLIYTSGCLDEMVWWGQQNLLLVGGMTLVLLCLEICMMSLASVQLCQIRNVQRR 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 60/247 (24%)
zgc:113223NP_001013569.1 Tetraspanin 13..>148 CDD:459767 38/143 (27%)
penumbra_like_LEL 106..226 CDD:239411 25/120 (21%)

Return to query results.
Submit another query.