DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and tspan5b

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_001008591.1 Gene:tspan5b / 494048 ZFINID:ZDB-GENE-041212-12 Length:271 Species:Danio rerio


Alignment Length:261 Identity:56/261 - (21%)
Similarity:106/261 - (40%) Gaps:69/261 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKYILFIFNLLCSICGILLIVF--------GALL-FSKVRNMDDFAEALRTQQVPVTM-IILGTI 62
            :||.:|.||::..:.|:..:..        |.|. .|.:.::..|.        ||.: :::|.:
Zfish    15 IKYFIFGFNIIFWLLGVAFLSVALWAWSEKGVLSNISSITDLGGFD--------PVWLFLVVGGV 71

  Fly    63 ILLISWFGCCGAIRESYCMSMTYSILLFV-----LMIGQLALVIYMWVQKDKYLEIMGDVVEKAW 122
            :.::.:.||.||:||:..:...:|:.|.:     |..|.||.|...|::......|..::  :|:
Zfish    72 MFVLGFAGCIGALRENSFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQLKFFINNNI--RAY 134

  Fly   123 NHRTSRSDYMDAIQISMKCCGRSGYTDYAYQGKF--------------PPSCCS-----DTNN-- 166
            .......:.:|..|...:|||..|..|:.....|              |.|||:     |..|  
Zfish   135 RDDIDLQNLIDFTQDYWECCGAFGPEDWNLNIYFNCTDTNLSREKCGVPFSCCTKDPAEDVINTQ 199

  Fly   167 CRWET-----------VYRRGCKVTFVEFWDRNSDIIKYAGLVIAAIEFVGF----VFACCLANS 216
            |.::.           ::.:||...|.::...|..::  ||:      |:|.    :|..|||.:
Zfish   200 CGYDIRGKGDIEHKTFIHTKGCVPQFEKWLQENLTVV--AGI------FIGIALLQIFGICLAQN 256

  Fly   217 I 217
            :
Zfish   257 L 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 55/257 (21%)
tspan5bNP_001008591.1 Tetraspanin 15..258 CDD:459767 56/261 (21%)
TM4SF9_like_LEL 113..233 CDD:239412 22/121 (18%)

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