DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and tspan14

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_001007871.1 Gene:tspan14 / 493257 XenbaseID:XB-GENE-868280 Length:270 Species:Xenopus tropicalis


Alignment Length:265 Identity:63/265 - (23%)
Similarity:116/265 - (43%) Gaps:50/265 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSCGISMVKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEALRTQQV-PVTMI-ILGTII 63
            :||   ..||:||.:|::..:.|::|:..|...:|:...:.|..:..|.... ||.:: ::|.|:
 Frog    11 VSC---CYKYLLFSYNIIFWLSGMVLLGVGLWAWSEKGILSDITKVTRLHGFDPVWLVLVVGVIM 72

  Fly    64 LLISWFGCCGAIRESYCMSMTYS---ILLFV--LMIGQLALVIYMWVQKDKYLEIMGDVVEKAWN 123
            ..:.:.||.||:||:.|:...:.   :|:|.  |.:..||.:...|| ||:..:...:.: |::.
 Frog    73 FTLGFAGCVGALRENICLLKFFCGAIVLIFFMELAVAVLAFLFQDWV-KDRAKDFFENNI-KSYR 135

  Fly   124 HRTSRSDYMDAIQISMKCCGRSGYTDYAYQGKF--------------PPSCCSD-------TNNC 167
            ......:.:|::|.:.:|||.....|:.....|              |.|||..       ...|
 Frog   136 DDIDLQNLIDSLQKANQCCGAVSPDDWDLNEYFNCSVENPSRERCGVPFSCCVPDPAQTVVNTQC 200

  Fly   168 RWE-----------TVYRRGCKVTFVEFW-DRNSDIIKYAGLVIAAIEFVGFVFACCLANSIR-- 218
            .::           |.:.:|| ::.:|.| .||..|:....|||:.::..|...|..|.:.|.  
 Frog   201 GYDARRKKPNERPNTTFSKGC-ISALEAWLPRNIYIVAGVFLVISILQIFGIYLARTLMSDIEAV 264

  Fly   219 --NYR 221
              .||
 Frog   265 KAGYR 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 58/246 (24%)
tspan14NP_001007871.1 Tetraspanin 16..257 CDD:459767 57/243 (23%)
TM4SF9_like_LEL 113..233 CDD:239412 23/122 (19%)

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