DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and tspan5a

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:XP_068078345.1 Gene:tspan5a / 450026 ZFINID:ZDB-GENE-041010-145 Length:301 Species:Danio rerio


Alignment Length:268 Identity:57/268 - (21%)
Similarity:110/268 - (41%) Gaps:72/268 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSCGISMVKYILFIFNLLCSICGILLIVFGALLFSK---------VRNMDDFAEALRTQQVPVTM 56
            :||   .:||.:|.||::..:.|:..:..|...:|:         :.::..|.        ||.:
Zfish    25 VSC---CIKYFIFGFNIIFWLLGVAFLGIGLWAWSEKGVLSNISSITDLGGFD--------PVWL 78

  Fly    57 -IILGTIILLISWFGCCGAIRESYCMSMTYSILLFV-----LMIGQLALVIYMWVQKDKYLEIMG 115
             :::|.::.::.:.||.||:||:..:...:|:.|.:     |..|.||.|...|::......|..
Zfish    79 FLVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGILAFVFKDWIKDQLNFFINN 143

  Fly   116 DVVEKAWNHRTSRSDYMDAIQISMKCCGRSGYTDYAYQGKF--------------PPSCCS---- 162
            ::  :|:.......:.:|..|...:|||..|..|:.....|              |.|||:    
Zfish   144 NI--RAYRDDIDLQNLIDFTQEYWECCGAFGADDWNLNIYFNCTDSNPSREKCGVPFSCCTKDPA 206

  Fly   163 -DTNN--CRWET-----------VYRRGCKVTFVEFWDRNSDIIKYAGLVIAAIEFVGF----VF 209
             |..|  |.::.           ::.:||...|.::...|..::  ||:      |:|.    :|
Zfish   207 EDVINTQCGYDVRAKPDAEQKTYIHVKGCVPQFEKWLQDNLTVV--AGI------FIGIALLQIF 263

  Fly   210 ACCLANSI 217
            ..|||.::
Zfish   264 GICLAQNL 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 54/257 (21%)
tspan5aXP_068078345.1 Tetraspanin 29..272 CDD:459767 55/261 (21%)
TM4SF9_like_LEL 127..247 CDD:239412 22/121 (18%)

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