DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Ea and tspan33a

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_001002617.2 Gene:tspan33a / 436890 ZFINID:ZDB-GENE-040718-361 Length:281 Species:Danio rerio


Alignment Length:258 Identity:59/258 - (22%)
Similarity:109/258 - (42%) Gaps:44/258 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MVKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEALRTQQVPVTMIILGTIILLISWFGC 71
            :|||:||.||::..|..::||..|  ::|::.. .:.|.|..|....:.::::|.::..|::.||
Zfish    20 VVKYLLFFFNMIFWIISLVLISIG--VYSRIVK-HETALACLTVDPALILMVVGILMFFITFCGC 81

  Fly    72 CGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYLEIMGDVVEKAWNHRTSRSDYMDAIQ 136
            .|::||:.|:..|:.|.|.::.:.||...:..:|..||....:.|:.:.|..|.....|..:.|.
Zfish    82 VGSLRENICLLQTFCIFLTIMFLLQLLAGVLGFVFSDKARGKVTDMFDNAIKHYRDDLDLQNLID 146

  Fly   137 ISMK---CCGRSGYTDYAYQGKF--------------PPSCCSDTNNCRWETVYR---------- 174
            ...|   |||...:.|::....|              |.|||.   :.:.||:..          
Zfish   147 YGQKQFNCCGGISFMDWSKNMYFNCSDDNPSRERCSVPFSCCL---HAKEETIINTMCGHGMQAL 208

  Fly   175 -----------RGCKVTFVEFWDRNSDIIKYAGLVIAAIEFVGFVFACCLANSIRNYRRRAEY 226
                       .||....|.:...|..::....|.:...:.||.:.:..|.|.|::..:...|
Zfish   209 NYLAASAFINTNGCIDILVNWIHSNLFLLGGIALGLTIPQLVGILLSQVLINQIQDQIKLQNY 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 56/244 (23%)
tspan33aNP_001002617.2 Tetraspanin 21..260 CDD:459767 56/244 (23%)
penumbra_like_LEL 114..234 CDD:239411 23/122 (19%)

Return to query results.
Submit another query.