DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Ea and Tsp86D

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_001262468.1 Gene:Tsp86D / 41310 FlyBaseID:FBgn0037848 Length:316 Species:Drosophila melanogaster


Alignment Length:261 Identity:67/261 - (25%)
Similarity:114/261 - (43%) Gaps:59/261 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SMVKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEA---LRTQ-------QVPVTMIILG 60
            |.|||::|:.|.|..:.|.||:..|...|     ||...:.   ||..       .:.:.|||.|
  Fly    29 SCVKYMIFLLNFLFWLFGGLLLAIGVYAF-----MDKLMDGNGWLRLDTIYDVIFNISLVMIIAG 88

  Fly    61 TIILLISWFGCCGAIRESYCMSMTYS--ILLFVLMIGQLALVIYMWVQ-KDKYLEI-MGDVVEKA 121
            .|:..:|:.||.||:||:..:...||  :|||.::...||::.:::.| .:.:||. ..|.:..:
  Fly    89 VIVFTVSFAGCLGALRENTWLLKLYSMCLLLFFILEMSLAIICFVFPQYMNSFLEYQFTDKIIHS 153

  Fly   122 WNHRTSRSDYMDAIQISMKCCGRS--GYTDYAYQGKF------------PPSCCSDTNN------ 166
            :...:...:::|..|....|||.|  ||.|::....|            |.|||.:..:      
  Fly   154 YRDDSDLQNFIDFAQQEFNCCGLSNAGYQDWSKNEYFNCSSPSVERCGVPYSCCINATDISSGLV 218

  Fly   167 ---CRW-----------ETVYRRGCKVTFVEFW-DRNSDIIKYAGLVIAAIEFVGFVFACCLANS 216
               |.:           :.::..|| :..|..| :||..:|....|.||.::    :|...||.:
  Fly   219 NIMCGYGVQVRSVAAASKRIWTSGC-IEIVRVWVERNLYVIAGVALGIALLQ----LFVIYLAKT 278

  Fly   217 I 217
            :
  Fly   279 L 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 65/255 (25%)
Tsp86DNP_001262468.1 Tetraspanin 51..279 CDD:459767 57/237 (24%)
penumbra_like_LEL 132..255 CDD:239411 24/123 (20%)

Return to query results.
Submit another query.