DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and cd9b

DIOPT Version :9

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:XP_005164541.1 Gene:cd9b / 406737 ZFINID:ZDB-GENE-040426-2768 Length:231 Species:Danio rerio


Alignment Length:236 Identity:61/236 - (25%)
Similarity:105/236 - (44%) Gaps:29/236 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSCGISMVKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEALRTQQVPVT----MIILGT 61
            :|.|...:|||:|.||.:..:.|..::..|..|....:. .:|..|...|.|.:|    :|:.|.
Zfish     7 LSSGEQCIKYIIFFFNFMLWLAGTGVLAVGLWLRFDAKT-KEFFTAENGQTVFLTGVYILIVAGA 70

  Fly    62 IILLISWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYLEIMGDV----VEKAW 122
            :::::.:.||||||:||.||...:.:.|.|:...::|..|:....|||   |:.|:    .:...
Zfish    71 VMMVVGFLGCCGAIKESACMLGLFFMFLLVIFAAEVAAGIWGLSNKDK---IVSDIQQFYTQTVK 132

  Fly   123 NHRTS----RSDYMDAIQISMKCCGRSGYTDYAYQGKFPPSCCSDTNNCRWE---TVYRRGCKVT 180
            |::.|    ..:.:.||..|::|||.:|..........|          :.|   .|...||...
Zfish   133 NYKESPDGPLKETLTAIHFSLQCCGPTGLVTDGVSVTCP----------KQEGLANVITTGCSSV 187

  Fly   181 FVEFWDRNSDIIKYAGLVIAAIEFVGFVFACCLANSIRNYR 221
            ..:.::....:|...|:.|..|...|.:|:..|..:||..|
Zfish   188 IQDMFNSRLHVIGGVGIGIGVIMVFGMIFSMLLCCAIRRTR 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspannin 8..217 CDD:278750 56/223 (25%)
tetraspanin_LEL 104..188 CDD:239401 19/94 (20%)
cd9bXP_005164541.1 Tetraspannin 13..224 CDD:278750 56/224 (25%)
CD9_LEL 113..196 CDD:239405 19/95 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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