DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and cd81

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_989271.1 Gene:cd81 / 394885 XenbaseID:XB-GENE-946220 Length:237 Species:Xenopus tropicalis


Alignment Length:233 Identity:49/233 - (21%)
Similarity:98/233 - (42%) Gaps:28/233 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEALRTQQVPVT-------MIILGTIILL 65
            :||:||:||.:..:.|.:::.....|....:..:...:....:..|.|       :|.:|.:::.
 Frog    10 IKYLLFVFNFIFWLAGGVILGVALWLRHDPQTSNLLFQQFEDKHAPGTFYIGVYIIIAVGAVMMF 74

  Fly    66 ISWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYLEIMGDVVEKAWNHRTSRS- 129
            :.:.||.|||:||.|:..|:...|.:|...::|..|:.:|.:|:..:.|.....:.:.|.|:.: 
 Frog    75 VGFLGCYGAIQESQCLLGTFFACLVILFACEVAAGIWGFVNRDQVSKEMRLFYSEVYQHATTGTK 139

  Fly   130 -------DYMDAIQISMKCCGRSGYTDYAYQGKFPPSCCSDTNNCR-----WETVYRRGCKVTFV 182
                   ..:.|...:::|||.:....|.        ..|.|:.|.     .|.:....|.....
 Frog   140 EQQQKALPVLKAFHETLQCCGDASLKKYV--------TMSITDMCPKRSNILEQITIEDCHQKID 196

  Fly   183 EFWDRNSDIIKYAGLVIAAIEFVGFVFACCLANSIRNY 220
            ..:.....::..|.:|:|.|..:..:|:..|...||.|
 Frog   197 VLFSTKLYLVGIAAVVVAVIMIIEMIFSMVLCCGIRIY 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 46/226 (20%)
cd81NP_989271.1 Tetraspanin 10..229 CDD:459767 46/226 (20%)

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