DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and tspan12

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_957446.1 Gene:tspan12 / 394127 ZFINID:ZDB-GENE-040426-1285 Length:301 Species:Danio rerio


Alignment Length:245 Identity:47/245 - (19%)
Similarity:101/245 - (41%) Gaps:46/245 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ISMVKYILFIFNLLCSICGILLIVFGALLFSKVRNM-----DDFAE--ALRTQQVPVTMIILGT- 61
            :..::.:|:..|.|..:..:.::...|.|..::.|:     |...|  |:||....|..:::.. 
Zfish     7 VKCLRCLLYALNFLFWLMALCVLGVSAYLRDQLNNVLTLTADTRLEEAAVRTYSPVVHPVVIAVC 71

  Fly    62 -IILLISWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMW----VQKDKYLEIMGDV---- 117
             .:::::..|.||.::.:..:...|...|.|:...:||..::.:    ||:...:.:...:    
Zfish    72 CFLIIVAMVGYCGTLKCNLLLLSWYFGSLMVIFCVELASGVWTYDEPMVQRSDMISLKSRMPHFG 136

  Fly   118 ------VEKAWNHRTSRSDYMDAIQISMKCCGRSGYTDY--AYQGKFPP-SCCSDT-NNCRWET- 171
                  :..|||          |:|..:||||...:||:  ..:.::|| ||||:. ..|..:. 
Zfish   137 LQRYQWLTHAWN----------ALQTELKCCGVIYFTDWLEMTEMEWPPDSCCSNQYPGCARQAH 191

  Fly   172 ------VYRRGCKVTFVEF--WDRNSDIIKYAGLVIAAIEFVGFVFACCL 213
                  :|:.||......|  ..:...::::.|:.|...:.:.......|
Zfish   192 YNDLSDLYQEGCGPKIYSFIRGTKQLQVLRFLGVSIGVAQILAMTLTVTL 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 47/242 (19%)
tspan12NP_957446.1 Tetraspanin 10..243 CDD:459767 47/242 (19%)
TM4SF12_like_LEL 113..215 CDD:239410 24/111 (22%)

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