DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and tspan31

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_956575.1 Gene:tspan31 / 393251 ZFINID:ZDB-GENE-040426-1123 Length:212 Species:Danio rerio


Alignment Length:234 Identity:50/234 - (21%)
Similarity:89/234 - (38%) Gaps:45/234 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSC-GISMVKYILFIFNLLCSICGILLIVFGAL-----LFSKVRNMDDFAEALRTQQVPVTMIIL 59
            |.| |.:..|..|...|::..:.|:||||..|.     :.|.:..:..             :|.:
Zfish     1 MVCGGFTCSKNALCSLNVVYMLVGLLLIVVAAWGKGFGIVSSIHIIGG-------------VIAV 52

  Fly    60 GTIILLISWFGCCGAIRESYCMSMTYSILLFVLMIGQLAL----VIYMWVQKDKYLEIMGDVVEK 120
            |..:.||:..|..||:.....|...|.::|||:.:.|..:    :.....|::|.|       |.
Zfish    53 GFFLQLIAIVGLIGAVHHHQVMLFFYMVILFVVFLFQFGVSCSCLAMNQGQQEKLL-------ES 110

  Fly   121 AWNHRTSRSDYMDAIQISMKCCGRSGYTDYAYQGKFPPSCCSDTNNCRWETVYRRGCKVTFVEFW 185
            :|  :...:|...:::..:.|||....|:      ......||.:.|......::.|.....:..
Zfish   111 SW--KIMSNDTRISLEKKLDCCGLFNSTN------LQADIMSDLHLCTSPCTQKKECVTCGPKML 167

  Fly   186 DRNSDIIKY---AGLVIAAIEFVGFVFACCLANSIRNYR 221
            ..:|:.:|.   .||..:..|.:|    ..||...||.:
Zfish   168 QYSSEALKILGGVGLFFSFTEILG----VWLAMRYRNQK 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 44/218 (20%)
tspan31NP_956575.1 Tetraspanin 9..198 CDD:459767 45/220 (20%)

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