DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and Tsp42Er

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_523644.1 Gene:Tsp42Er / 35629 FlyBaseID:FBgn0033139 Length:211 Species:Drosophila melanogaster


Alignment Length:222 Identity:65/222 - (29%)
Similarity:107/222 - (48%) Gaps:19/222 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MVKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEALRTQQVPVTMIILGTIILLISWFGC 71
            |::|:.|:||.||::.||..||...:...::...|.....|        .|.:|:|:.|:|:|||
  Fly     7 MIRYLAFLFNFLCAVLGIATIVVNVIAIDQIAPKDQLILGL--------YIAVGSIVFLLSFFGC 63

  Fly    72 CGAIRESYCMSMTYSILLFVLMIGQLAL--VIYMWVQKDKYLEIMGDVVEKAWNHRTSRSDYMDA 134
            .|||:||.|::..|:..:.|::|..:.:  |..|..::|...::     ::|:..:|:..|.|..
  Fly    64 FGAIKESICVTWAYATSMLVMLIVSIVMLFVFRMHFEEDSITKL-----KQAFAKQTNTFDAMAE 123

  Fly   135 IQISMKCCGRSGYTDYAYQGKFPPSCCSDTNNCRWETVYRRGCKVTFVEFWDRNSDIIKYAGLVI 199
            .|...:|||.....||.......||.|.|.|    :|.||.||.......::......|..|.::
  Fly   124 YQTQYQCCGIYKLKDYGDAYITVPSSCYDQN----DTPYRDGCLAKMETQYEELLKGPKIVGWML 184

  Fly   200 AAIEFVGFVFACCLANSIRNYRRRAEY 226
            ..||...|.|:..:..|:||..||:.|
  Fly   185 MVIEIGAFTFSTIMGVSLRNELRRSAY 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 58/208 (28%)
Tsp42ErNP_523644.1 Tetraspanin 8..195 CDD:459767 57/203 (28%)

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