DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and Tsp42Eg

DIOPT Version :9

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster


Alignment Length:235 Identity:59/235 - (25%)
Similarity:109/235 - (46%) Gaps:29/235 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSCGISMVKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEALRTQQVPVTMIILGTIILL 65
            |:|..:::|.....::::.::.|:::|..|..:..|..:.:..|         ..:|.:|.:::|
  Fly     1 MACSTNVLKGFALFWDIILALFGLVVIGLGVHIIYKFEHFNTAA---------FVIIAVGVVVVL 56

  Fly    66 ISWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYLEIMGDVVEKAWNH-----R 125
            .:.||..||.|||...|..:.::|.||:|.::..|.::||.:...|..:....:|.||.     :
  Fly    57 TALFGALGAARESSATSKVFVVILIVLVILEVLAVGFLWVFQTSLLINVDKTFDKLWNDQPVPIK 121

  Fly   126 TSRSDYMDAIQISMKCCGRSGYTDYAYQGKFPPSCC----SDTNNCRWETVYRRGCKVTFVEFWD 186
            ......:.:::..:.|||..|.:||.    .||:.|    ||..|.       .||:..|::|..
  Fly   122 PGNQSQIASLERWLDCCGNVGPSDYI----LPPNSCYNGESDKLNL-------EGCRQKFLDFIA 175

  Fly   187 RNSDIIKYAGLVIAAIEFVGFVFACCLANSIRNYRRRAEY 226
            ..........||:..:|.:..:.|..|||||.|..||::|
  Fly   176 DRWTTFNLVSLVLLGVELICALLAYVLANSIVNRWRRSKY 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspannin 8..217 CDD:278750 51/217 (24%)
tetraspanin_LEL 104..188 CDD:239401 22/92 (24%)
Tsp42EgNP_523633.1 Tetraspannin 17..202 CDD:395265 47/204 (23%)
tetraspanin_LEL 95..176 CDD:239401 22/91 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443013
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001737
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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