DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and Tsp42Ee

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_523631.1 Gene:Tsp42Ee / 35614 FlyBaseID:FBgn0029506 Length:228 Species:Drosophila melanogaster


Alignment Length:234 Identity:107/234 - (45%)
Similarity:146/234 - (62%) Gaps:14/234 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSCGISMVKYILFIFNLLCSICGILLIVFGALLFS-----KVRNMDDF-AEALRTQQVPVTMIIL 59
            |.||.|||||||||||.:.|:.|||.||:|.|:..     :|.....| .:||    :|:.:|.|
  Fly     1 MDCGTSMVKYILFIFNTIVSVIGILGIVYGVLILKSIGVVEVNGQVGFPIQAL----MPIILISL 61

  Fly    60 GTIILLISWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYLEIMGDVVEKAWN- 123
            |:|::.||:.|||||||||.||:|:|:..|.:|:|.||..|:.::..::::...||:|:|.||| 
  Fly    62 GSIVVFISFLGCCGAIRESVCMTMSYATFLLILLILQLTFVVLLFTHREEFENAMGNVIENAWNS 126

  Fly   124 HRTSRSDYMDAIQISMKCCGRSGYTDYAYQGKF-PPSCCSDTNNCRWETVYRRGCKVTFVEFWDR 187
            ..|.:....|.||.|:.|||.|...||..:|.. ||||||  .:|...|.|..||:..|||....
  Fly   127 EHTYKGGVFDTIQKSLHCCGSSSALDYIGKGDLVPPSCCS--GSCLIPTNYYPGCRGKFVELMTT 189

  Fly   188 NSDIIKYAGLVIAAIEFVGFVFACCLANSIRNYRRRAEY 226
            .||..||.|:.:..||.:||:|||||||::|||:||..|
  Fly   190 GSDNAKYVGIGLIGIELIGFIFACCLANNVRNYKRRNAY 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 94/214 (44%)
Tsp42EeNP_523631.1 Tetraspanin 8..217 CDD:459767 94/214 (44%)

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