DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and Tsp29Fa

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster


Alignment Length:240 Identity:74/240 - (30%)
Similarity:120/240 - (50%) Gaps:40/240 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEALRTQQVPVTMIILGTIILLISWFGCC 72
            |||.||.|||:..|.||:||..||.:.:.......|. |.:...:|..:|::|:.|::||:|||.
  Fly    11 VKYTLFGFNLIFLITGIILIAVGAGVGAVYTGYKLFL-AGKFFSIPTFLIVIGSFIIIISFFGCW 74

  Fly    73 GAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQK---------------DKYLEIMGDVVEKAW 122
            ||::|:||:.:::|::|.::.|.:||..|..:|.:               ::|..|..:...|.|
  Fly    75 GALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNEYNSINPNATTKLW 139

  Fly   123 NHRTSRSDYMDAIQISMKCCGRSGYTDY--AY-QGKFPPSCCS---------DTNNCRWETVYRR 175
                      |.||...:|||.:.|.|:  |: .|..|.|||:         ..||.:.....|.
  Fly   140 ----------DDIQDEFECCGVTSYNDWITAFPNGDLPISCCNVHVGAVGTFTCNNAQSSVADRH 194

  Fly   176 --GCKVTFVEFWDRNSDIIKYAGLVIAAIEFVGFVFACCLANSIR 218
              ||...|..:...::..:..||:|||.::|.|.:|||.:|..|:
  Fly   195 KVGCLDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAREIK 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 72/235 (31%)
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 72/235 (31%)
tetraspanin_LEL 126..201 CDD:351888 23/84 (27%)

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