DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and tspan17

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:XP_073777297.1 Gene:tspan17 / 324950 ZFINID:ZDB-GENE-030131-3673 Length:311 Species:Danio rerio


Alignment Length:269 Identity:66/269 - (24%)
Similarity:110/269 - (40%) Gaps:72/269 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSCGISMVKYILFIFNLLCSICGILLIVFGALLF---------SKVRNMDDFAEALRTQQVPVTM 56
            :||   .|||.||.||::..:.|...:..|...:         |.:.::..|.        ||.:
Zfish    20 VSC---CVKYFLFGFNIIFWLLGAAFLGIGLWAWAEKGVLSNISSITDLGGFD--------PVWL 73

  Fly    57 -IILGTIILLISWFGCCGAIRESYCMSMTYSI---LLFVLMI--GQLALVIYMWVQKDKYLEIMG 115
             |::|.::.::.:.||.||:||:..:...:|:   |:|.|.:  |.||.|...|::......|..
Zfish    74 FIVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGLIFFLELTAGILAFVFKDWIKDQLNFFINN 138

  Fly   116 DVVEKAWNHRTSRSDYMDAIQISMKCCGRSGYTDYAYQGKF--------------PPSCC----- 161
            :|  ||:.......:.:|..|....|||..|..|:.....|              |.|||     
Zfish   139 NV--KAYRDDIDLQNLIDFAQEYWSCCGAHGPNDWNLNIYFNCTDFNPSRERCGVPFSCCVKDPA 201

  Fly   162 SDTNN--CRWET-----------VYRRGCKVTFVEFWDRNSDIIKYAGLVIAAIEFVGF----VF 209
            .|..|  |.::.           :|.:||...| |.|.:::       |::.|..|||.    :|
Zfish   202 EDVLNTQCGYDVRLQVELDQQKYIYTKGCVGQF-EKWLQDN-------LIVVAGVFVGIALLQIF 258

  Fly   210 ACCLANSIR 218
            ..|||.:::
Zfish   259 GICLAQNLK 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 63/257 (25%)
tspan17XP_073777297.1 None

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