DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and cd82b

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_997828.1 Gene:cd82b / 324137 ZFINID:ZDB-GENE-030131-2857 Length:256 Species:Danio rerio


Alignment Length:256 Identity:68/256 - (26%)
Similarity:124/256 - (48%) Gaps:39/256 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ISMVKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEALRTQQVPV-----TMIILGTIIL 64
            |:..||.||:||||..|.|.:::.||  |:.:: :...|...|:.....:     .:|.:|::.:
Zfish     6 IAATKYFLFLFNLLFFILGAVIMGFG--LWVRL-DSQSFLTVLQESSTSLKVGAYILIGIGSLSM 67

  Fly    65 LISWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKD----KYLEIMGDVVEKAWNHR 125
            |:.:.||.|||.|..|:...|...|.:::|.|:...:.::.|:|    :...|:..::.......
Zfish    68 LMGFLGCIGAIYEIRCLLGLYFTCLLLILIAQVTAAVLIYFQRDLLKGETYNIVNKILVNYTGSN 132

  Fly   126 TSRSDYMDAIQISMKCCGRSGYTDYAYQGK--------FPPSCCSDTNN---------C-----R 168
            .:..|..|.||.:|||||.||.:|:.....        :|.||.:::.:         |     :
Zfish   133 NTSEDAWDYIQRTMKCCGWSGQSDWKENVMIKNNSKILYPCSCRNESISGSDKQEKGFCEGLSPQ 197

  Fly   169 WETVYRRGCKVTFVEFWD-RNSDIIKYAGLVIAAIEFVGFVFACCLANSIR--NYRRRAEY 226
            | .|:.:|| ::.:|.|. ||..:|....:.||.||.:|.:.:.||..|::  :|.:..:|
Zfish   198 W-PVFTKGC-ISSLEDWILRNCGVILGVCVGIAVIELLGMILSMCLCKSVQQEDYTKVPKY 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 64/238 (27%)
cd82bNP_997828.1 Tetraspanin 24..243 CDD:459767 55/223 (25%)
CD37_CD82_like_LEL 106..218 CDD:239413 27/113 (24%)

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