DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and cd9a

DIOPT Version :9

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:XP_005159038.1 Gene:cd9a / 322455 ZFINID:ZDB-GENE-030131-1175 Length:228 Species:Danio rerio


Alignment Length:227 Identity:55/227 - (24%)
Similarity:98/227 - (43%) Gaps:17/227 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GISMVKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEALRTQQVPVT----MIILGTIIL 64
            |...|||::|:||.:..|.|..::..|..|....:....| |...:..|..|    :|..|.:::
Zfish     7 GEMCVKYLMFVFNFIFWIAGTAVLAVGLWLRFDPKTKSLF-EGENSPYVFYTGVYILIAAGALMM 70

  Fly    65 LISWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYLEIMGDVVEKAWN-HRTSR 128
            ::.:|||||||:||.||...:...|.|:...::|..|:.:..:.|..|.:.....:.:: ::.|:
Zfish    71 VVGFFGCCGAIQESPCMLGLFFFFLLVIFAVEVAAGIWGFSNQTKVTEDITTFYRQTYDTYQQSK 135

  Fly   129 SDYMD----AIQISMKCCGRSGYTDYAYQGKFPPSCCSDTNNCRWETVYRRGCKVTFVEFWDRNS 189
            .:.:.    ..|..:.|||.||    ..|.....:|.....   .:.:..:.|.....|.::...
Zfish   136 QEALKKTLRLFQHGLNCCGPSG----NMQESLDETCPKKEG---LDNLIIKSCPDAIDEVFNSKL 193

  Fly   190 DIIKYAGLVIAAIEFVGFVFACCLANSIRNYR 221
            .||...|:....|...|.:|:..|..:||..|
Zfish   194 HIIGGVGIATGVIMIFGMIFSMMLCCAIRKTR 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspannin 8..217 CDD:278750 51/217 (24%)
tetraspanin_LEL 104..188 CDD:239401 13/88 (15%)
cd9aXP_005159038.1 Tetraspannin 10..221 CDD:278750 51/218 (23%)
CD9_LEL 110..193 CDD:239405 13/89 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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