DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Ea and Tsp3A

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster


Alignment Length:269 Identity:70/269 - (26%)
Similarity:115/269 - (42%) Gaps:63/269 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKYILFIFNLLCSICGILLIVFGALLF--------SKVRNMDDFAEALRTQQVPVTMIILGTIIL 64
            |||::|:.|.:..:.|.||:..|...|        ..|| :::|.:..  ..:.:.||:.||:|.
  Fly    43 VKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVR-LENFYDVF--LNISLVMILAGTVIF 104

  Fly    65 LISWFGCCGAIRESYCMSMTYS--ILLFVLMIGQLALVIYMWVQKDKYLEIMGDVVEKAWNHRTS 127
            |:|:.||.||:||:..:...||  :|||.|:...:|:|.::..|      .|...:||.:.|:..
  Fly   105 LVSFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQ------YMNTFLEKQFTHKII 163

  Fly   128 RS--------DYMDAIQISMKCCG--RSGYTDYAYQGKF------------PPSCCSDTNN---- 166
            .|        :::|..|...||||  .|||.|::....|            |.|||.:..:    
  Fly   164 HSYRDDPDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCGVPYSCCINATDISSG 228

  Fly   167 -----CRW-----------ETVYRRGCKVTFVEFW-DRNSDIIKYAGLVIAAIEFVGFVFACCLA 214
                 |.:           :.::..|| :..|..| :.|..:|....|.||.|:.:....|..|.
  Fly   229 LVNIMCGYGVQNAPVPEATKLIWTSGC-IEIVRVWAEHNLYVIAGNALGIALIQLLVIYLAKTLE 292

  Fly   215 NSIRNYRRR 223
            ..|...:.|
  Fly   293 GQIELQKSR 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 68/259 (26%)
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 44/152 (29%)
penumbra_like_LEL 144..267 CDD:239411 26/129 (20%)

Return to query results.
Submit another query.