Protein Alignment Tsp42Ea and Tspan3

DIOPT Version :9

• Sequence 1: NP_525012.2
• Gene: Tsp42Ea / 59178
• FlyBaseID: FBgn0029508
• Length: 226
• Species: Drosophila melanogaster
• Sequence 2: NP_001005547.1
• Gene: Tspan3 / 300733
• RGDID: 1359444
• Length: 253
• Species: Rattus norvegicus
• Alignment Length: 229
• Identity: 63/229 - (27%)
• Similarity: 107/229 - (46%)
• Gaps: 21/229 - (9%)

  Fly     3 CGISMVKYILFIFNLL-CSICGILLIVFGALLFSKVRNMDDFAEALRTQQVPVTMIILGTIILLI 66
            |||:..|.:|...||: ....|||..| ||.:|....:.|.|.|.:.|....|.::.:|.::.:|
  Rat     4 CGITSSKTVLVFLNLIFWGAAGILCYV-GAYVFITYDDYDHFFEDVYTLFPAVVIMAVGALLFII 67

  Fly    67 SWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYLEIMGDVVEKAW-NHRTSRSD 130
            ...|||..||||.|...|:..:|.::.:.::.:|:..:|.:.|....:...::|.: .:..:.||
  Rat    68 GLIGCCATIRESRCGLATFVFILLLVFVTEVVVVVLGYVYRAKVENEVDRSIQKVYKTYNGTNSD 132

  Fly   131 ----YMDAIQISMKCCGRSGYTDYAYQGKF--------PPSCCSDT-NNCRW-----ETVYRRGC 177
                .:|.:|..:.|||...|:|:.....|        |.|||.:| .:|..     ..:|..||
  Rat   133 AASRAIDYVQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRETARSCNGSLANPSDLYAEGC 197

  Fly   178 KVTFVEFWDRNSDIIKYAGLVIAAIEFVGFVFAC 211
            :...|:........:.:|.|..|||:.:|.:.||
  Rat   198 EALVVKKLQEILMHVIWAALAFAAIQLLGMLCAC 231

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp42Ea	NP_525012.2	Tetraspannin	8..217	CDD:278750	60/224 (27%)
		tetraspanin_LEL	104..188	CDD:239401	23/102 (23%)
Tspan3	NP_001005547.1	Tetraspannin	10..237	CDD:278750	60/223 (27%)
		TM4SF8_like_LEL	104..210	CDD:239416	23/105 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3882
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1406905at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820