DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and Cd63

DIOPT Version :9

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:XP_008763246.1 Gene:Cd63 / 29186 RGDID:62080 Length:262 Species:Rattus norvegicus


Alignment Length:232 Identity:68/232 - (29%)
Similarity:125/232 - (53%) Gaps:20/232 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GISMVKYILFIFNLLCSICGILLIVFGA---LLFSKVRNMDDFAEALRTQQVPVTMIILGTIILL 65
            |:..||::|::..|....|.:.||..|.   ::..:....:..|.:|    :||.:|.:|..:.|
  Rat    30 GMKCVKFLLYVLLLAFCACAVGLIAIGVAVQVVLKQAITHETTAGSL----LPVVIIAVGAFLFL 90

  Fly    66 ISWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKY-LEIMGDVVEKAWNHRTSR- 128
            :::.|||||.:|:||:.:|::|.|.::|:.::|:.|..:|.:|:. .|......::..|:.|.. 
  Rat    91 VAFVGCCGACKENYCLMITFAIFLSLIMLVEVAVAIAGYVFRDQVKSEFSKSFQKQMQNYLTDNK 155

  Fly   129 -SDYMDAIQISMKCCGRSGYTDY-----AYQGKFPPSCCSDT-----NNCRWETVYRRGCKVTFV 182
             :..:|.:|...||||.|.|||:     ..:.:.|.|||.:.     |:.:..|::.:||..|..
  Rat   156 TATILDKLQKENKCCGASNYTDWERIPGMAKDRVPDSCCINITVGCGNDFKESTIHTQGCVETIA 220

  Fly   183 EFWDRNSDIIKYAGLVIAAIEFVGFVFACCLANSIRN 219
            .:..:|..::..|.|.||.:|.:|.:|:|||..|||:
  Rat   221 AWLRKNVLLVAGAALGIAFVEVLGIIFSCCLVKSIRS 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspannin 8..217 CDD:278750 64/224 (29%)
tetraspanin_LEL 104..188 CDD:239401 24/96 (25%)
Cd63XP_008763246.1 Tetraspannin 33..255 CDD:278750 64/225 (28%)
ATP-synt_A <72..131 CDD:294288 21/62 (34%)
CD63_LEL 129..227 CDD:239419 24/97 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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