DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and TSPAN17

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_001353420.1 Gene:TSPAN17 / 26262 HGNCID:13594 Length:355 Species:Homo sapiens


Alignment Length:289 Identity:64/289 - (22%)
Similarity:108/289 - (37%) Gaps:93/289 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CGISMVKYILFIFNLLCSICGILLIVFGAL------LFSKVRNMDDFAEALRTQQVPVTM-IILG 60
            ||    ||.||.||::..:.|.|.:..|..      :.|.:..:.|....     .||.: :::|
Human    16 CG----KYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGGL-----DPVWLFVVVG 71

  Fly    61 TIILLISWFGCCGAIRESYCMSMTYSI---LLFVLMI--GQLALVIYMWVQKDKYLEIMGDVVEK 120
            .::.::.:.||.||:||:..:...:|:   |:|.|.:  |.||.|...|::....|.|..:|  |
Human    72 GVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELATGILAFVFKDWIRDQLNLFINNNV--K 134

  Fly   121 AWNHRTSRSDYMDAIQISMKCCGRSGYTDYAYQGKF--------------PPSCC-----SDTNN 166
            |:.......:.:|..|....|||..|..|:.....|              |.|||     .|..|
Human   135 AYRDDIDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRERCGVPFSCCVRDPAEDVLN 199

  Fly   167 --CRWET-----------VYRRGCKVTFVEFWDRNSDIIKYAGLVIAAIEFVGF----------- 207
              |.::.           ::.:||...| |.|.:::       |::.|..|:|.           
Human   200 TQCGYDVRLKLELEQQGFIHTKGCVGQF-EKWLQDN-------LIVVAGVFMGIALLQVPLWPHV 256

  Fly   208 -------------------VFACCLANSI 217
                               :|..|||.::
Human   257 PLPLPGPPSLSPHLSSVLQIFGICLAQNL 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 61/280 (22%)
TSPAN17NP_001353420.1 Tetraspanin 18..>157 CDD:459767 37/145 (26%)
TM4SF9_like_LEL 115..235 CDD:239412 27/129 (21%)

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