DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and tsp-2

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_498803.1 Gene:tsp-2 / 259752 WormBaseID:WBGene00006628 Length:234 Species:Caenorhabditis elegans


Alignment Length:188 Identity:43/188 - (22%)
Similarity:72/188 - (38%) Gaps:43/188 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSCGISMVKYI-LFIFNLLCSICGILLIVFGALLFSKVRNMD---------------DFAEALRT 49
            |:..|:.:..| :|..:|....|.|.|.::|:|:..|....|               |....:|:
 Worm     1 MTSRIAFISRITIFCLSLAMLFCSIGLDIWGSLMEDKSYERDLKDVVFNYNSSQPLADDKFDMRS 65

  Fly    50 QQVPVTMIILGTIILL--ISWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYLE 112
            ....|...|.|..|:.  :|..|..|||.:...:..|..:|:.:..|.:|...|.:|.::.....
 Worm    66 WIYSVYWSIYGLCIIAGPLSIIGLIGAISQKKPVLATCLVLIVIFFIMELGGSIALWSKRGSLRS 130

  Fly   113 IMGDVVEKAWNHRTSRSDYM-------DAIQISMKCCG-RSGYTDYAYQGKFP--PSC 160
            ::         :|.:...|:       ..||.:..||| :.|      |.|.|  |||
 Worm   131 LL---------YRFANDIYLTNSVFDISIIQNTYNCCGVQDG------QWKCPNAPSC 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 41/181 (23%)
tsp-2NP_498803.1 Tetraspanin <84..203 CDD:459767 25/105 (24%)

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