DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and Tspan7

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_062608.2 Gene:Tspan7 / 21912 MGIID:1298407 Length:249 Species:Mus musculus


Alignment Length:235 Identity:65/235 - (27%)
Similarity:107/235 - (45%) Gaps:27/235 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ISMVKYILFIFNLLCSICGILLI---VFGALLFSKVRNMDDFAEALRTQQVPVTMIILGTIILLI 66
            |:.:|.:|.|::.:..|.|::|:   |:|.|......::  .||  .:...|..:|..||.|::.
Mouse    12 ITCLKTLLIIYSFVFWITGVILLAVGVWGKLTLGTYISL--IAE--NSTNAPYVLIGTGTTIVVF 72

  Fly    67 SWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWV----QKDKYLEIMGDVVEKAWNHRTS 127
            ..|||....|.|..|...|::.|.::.:.:|...|..:|    .||.:|....|.::. :|....
Mouse    73 GLFGCFATCRGSPWMLKLYAMFLSLVFLAELVAGISGFVFRHEIKDTFLRTYTDAMQN-YNGNDE 136

  Fly   128 RSDYMDAIQISMKCCGRSGYTDYAYQGKF-----PPSCCSDTNNCR----------WETVYRRGC 177
            ||..:|.:|.|:.|||...||:::....|     |||||.:..:|.          ...|.::||
Mouse   137 RSRAVDHVQRSLSCCGVQNYTNWSSSPYFLDHGIPPSCCMNETDCNPLDLHNLTVAATKVNQKGC 201

  Fly   178 KVTFVEFWDRNSDIIKYAGLVIAAIEFVGFVFACCLANSI 217
            ......|.:.|..||......||..:.:|.:.||||:..|
Mouse   202 YDLVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCLSRFI 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 63/228 (28%)
Tspan7NP_062608.2 Tetraspanin 15..239 CDD:459767 63/228 (28%)
TM4SF2_6_like_LEL 110..213 CDD:239414 27/103 (26%)

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