DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and Tspan10

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_663338.2 Gene:Tspan10 / 208634 MGIID:2384781 Length:332 Species:Mus musculus


Alignment Length:255 Identity:59/255 - (23%)
Similarity:103/255 - (40%) Gaps:42/255 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSCGISMVKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEALRTQQVPVTMIILGTIIL- 64
            :|.|.:.|||::|:.|.|.|:..:|.:..| |....|:..............|:.|::||.::: 
Mouse    68 LSTGSNCVKYLIFLSNFLFSLPSLLALAAG-LWGLTVKRSQGIGWGGPVPTDPMLMLVLGGLVVS 131

  Fly    65 LISWFGCCGAIRESYCMSMTY-SILLFVLMIGQLA--LVIYMWVQKDKYLEIMGDVVEKAWNHRT 126
            ::|..||.||..|:.|:...| ..:||.|.:..||  |::.:|......|:.   .:..|..|..
Mouse   132 VVSLSGCLGAFCENSCLLHWYCGAVLFCLALEALAGVLMVTLWKPLQDSLKY---TLHAAIIHYW 193

  Fly   127 SRSD---YMDAIQISMKCCGRSGYTDYAYQGKF------------PPSCCSD------------- 163
            ...|   .:|.:|:.::|||...|.|:.....|            |.|||.:             
Mouse   194 DDPDLHFLLDQVQLGLQCCGAVSYQDWQQNLYFNCSSPGVQACSLPASCCINPQEDGAVVNTQCG 258

  Fly   164 ------TNNCRWETVYRRGCKVTFVEFWDRNSDIIKYAGLVIAAIEFVGFVFACCLANSI 217
                  ..|...:.|:.:||.....|:...|:..|....:.:..|:....:.|.||..::
Mouse   259 FGALGLDQNVAGQVVFLQGCWPALQEWLRGNTGAIGDCAVAVVMIQGTELLLAACLLRAL 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 57/244 (23%)
Tspan10NP_663338.2 Tetraspanin 75..225 CDD:459767 41/153 (27%)
oculospanin_like_LEL 171..290 CDD:239420 22/121 (18%)

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