DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and tsp-17

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_001129920.2 Gene:tsp-17 / 192067 WormBaseID:WBGene00006643 Length:312 Species:Caenorhabditis elegans


Alignment Length:737 Identity:138/737 - (18%)
Similarity:232/737 - (31%) Gaps:234/737 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 SAVDASKKTTSATGWQSVGLFVPDGSGRQAAKVIDTPPVAPPRKKRGATLDGRYRSDEALKVKNG 113
            |.|...|....|:|   :.|||...:            .:|..|::..    |..|.|....||.
 Worm    70 SLVSIYKNMEDASG---IKLFVSQNN------------PSPSDKEKQV----RDASVEKASDKNR 115

  Fly   114 FQDVFGRESRRHSCDISSVTRPASVPPPRPDDVAALPARQTSCFEIDASNDAFSDFSKVPTTAEL 178
            .....||.|:|:.   ...|:...|..|.|  :...|:.||.              .:|.....|
 Worm   116 QGSRKGRASKRNE---YGKTKEIDVDAPGP--IVMKPSSQTK--------------KRVQLLQNL 161

  Fly   179 ERTPSTSQIPRVGNRKSDKFFGE----RLADSLSLEQEGQQGAEVRKQPRREKSSASSLVRDDVD 239
            .....|.....|...:..|.:.|    ||.:..||.:||             ..|....:||: |
 Worm   162 SAESLTKPTESVETAEKPKDYTENTVIRLDEHPSLNKEG-------------NLSPFFWLRDE-D 212

  Fly   240 KIEKFVESTETSAEVKQKPEKKPTASDEPAAAPEKPEGEEDLMKYIDRTVAKDNQIGRRAEFLMA 304
            ..|...:.||:...:...|...|:.||...:..|.|..|::..        |.|.          
 Worm   213 DGENSSQRTESDQLLGTTPVNVPSFSDLMDSDHESPSKEDEQQ--------KPNP---------- 259

  Fly   305 MLEDYNDSVRYEGMEPVEEPLIVPKRRKSKHICDD------------------------------ 339
              .|..||..:|..:....|.|:|...|:|.:..|                              
 Worm   260 --GDMFDSEMFEWTQRPCSPEILPSPVKAKVLGRDEIDLTQKKLPKVKVASSKCKNRKAGSARNT 322

  Fly   340 ----------HDHMHDKLHA---HERDA-SASG-VVRTEVSIEQAPRKPSRDFSRYKPIDAAEPH 389
                      .|:|.....|   .::|: ..|| ::|.:|:.::..:......|:.:........
 Worm   323 VARRSIGVSQEDNMESSAAATISEQQDSRGTSGTIIRNDVNTDENVKAKRATRSKAQSTRVQSDL 387

  Fly   390 GSSDGSDGEQGSVVRPARTKQKQRESAARAAPPQTPPPPAPPRFQKSHSETQFTNAASSSTQLAQ 454
            ..|:.:||:||:         |::.|:.:::|..   |.|.|            |..|..|::..
 Worm   388 NVSNEADGKQGT---------KRKRSSIKSSPAH---PIAGP------------NELSLGTEIVG 428

  Fly   455 PAQDDDEPKAHTPRMLKRIISMPATEHLDKVPSRPDTPQRPTLTK--SSSSGSFSVVDLQRTLIS 517
            ..   |:.:||.|.              |..|.:....::|:|.|  ..|:.|.|:.||..   .
 Worm   429 KG---DQDQAHGPS--------------DTHPEKRSPTEKPSLKKRGRKSNASSSLKDLSG---K 473

  Fly   518 VERFTPEDFVHRAGADELVKPKSKLTTRKISWKSNEPPTPVATDGPAGASFTIGG---------- 572
            .::.|.|             .|.||.:..||.|:.:|    ..:|...|....||          
 Worm   474 TQKKTSE-------------KKLKLDSHMISSKATQP----HGNGILTAGLNQGGDKQDSRNNRK 521

  Fly   573 TTVVTTSAPPEVPARHRSDASRTEPEPAAPAKSAPTSAASFLVDDVQDSSLRQFCLGSFLESSRV 637
            :||            .:.|.:....|..:....:.:..::.|          :.|.||..:.   
 Worm   522 STV------------GKDDHTMQVIEKCSTINKSSSGGSAHL----------RRCNGSLTKK--- 561

  Fly   638 LPHHDVVNVLDCVY-SATDNKENILEQFQTFLEEALTAELNAPNPTNPNVRKLREKLSQ-AQEAA 700
                     ..|.: ..:::.|...|....:..|.::|:.|.    ...|..:.:..:: |....
 Worm   562 ---------FTCAFCQCSEDTEASGEMTHYYRGEPVSADFNG----GSKVIHVHKNCAEWAPNVY 613

  Fly   701 DGDSQLENESIKLAGSSRTSCS 722
            ..|..:.|..::|..|.|.|||
 Worm   614 FNDLTIVNLDVELTRSRRISCS 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 38/169 (22%)
tsp-17NP_001129920.2 Tetraspanin 11..>150 CDD:459767 24/103 (23%)
CD37_CD82_like_LEL 153..275 CDD:239413 32/155 (21%)

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