DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and tsp-7

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_492636.1 Gene:tsp-7 / 192062 WormBaseID:WBGene00006633 Length:232 Species:Caenorhabditis elegans


Alignment Length:235 Identity:76/235 - (32%)
Similarity:125/235 - (53%) Gaps:37/235 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GISMVKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFA--EALRTQQVPVTMIILGTIILLI 66
            |:::|||:||:.||:..:.|:.||:.|::|..|..|:.|..  |.|.|   |:.::::|::..|:
 Worm     5 GVTIVKYLLFLANLVLWVGGLSLIIVGSILQLKFDNVLDILGDERLAT---PILLLVIGSLCTLL 66

  Fly    67 SWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKD---------------KYLEIMGD 116
            .:.||||||||:||:::::::||.:|:..::|.||..:...|               :|.|..| 
 Worm    67 GFLGCCGAIRENYCLTVSFAVLLALLITCEIAAVIIGYALHDSFRLGIGNQLQTGMVRYHESRG- 130

  Fly   117 VVEKAWNHRTSRSDYMDAIQISMKCCGRSGYTDYAYQGKFPPSCC-SDTNNCRWET--VYRRGCK 178
             ||.||          |......:|||.:..:|:......|.||| .:...|..|.  ::..|| 
 Worm   131 -VESAW----------DKTHQLFECCGVTNSSDWLTFTTIPDSCCIEEIEGCARENAPLFEPGC- 183

  Fly   179 VTFVEFWD-RNSDIIKYAGLVIAAIEFVGFVFACCLANSI 217
            :..||.|. :|..::.....|:|||:.||..|||||:.||
 Worm   184 IHSVEQWVLKNGAMVGGICAVLAAIQLVGVCFACCLSKSI 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 73/227 (32%)
tsp-7NP_492636.1 Tetraspanin 9..221 CDD:459767 73/227 (32%)
NET-5_like_LEL 104..195 CDD:239418 24/103 (23%)

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