DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and tsp-4

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_502396.2 Gene:tsp-4 / 192060 WormBaseID:WBGene00006630 Length:241 Species:Caenorhabditis elegans


Alignment Length:124 Identity:25/124 - (20%)
Similarity:50/124 - (40%) Gaps:35/124 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   618 VQDSSLRQFCLGSFLESSRVLPHHDVVNVLDCVYSATDNKENILEQFQTFL-------------E 669
            :.::|.:.|||..|       |...::.:...::|:..|.|:..:||.:.|             .
 Worm     1 MSNNSSKSFCLLGF-------PLILILLLSFLLFSSFPNNESPPQQFFSSLTMSSLLVHTNALQS 58

  Fly   670 EALTAELNAPNPT---NPNVRKLREKLSQAQEAADGDSQLENESIKLAGSSRTSCSSSE 725
            .:.::.|.:|..|   ..|:.|..|:|.:|:.|.....:.:|            |:|:|
 Worm    59 SSSSSSLYSPPITVKRRSNLEKREEELRKARAAIRRAVRFKN------------CTSNE 105

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767
tsp-4NP_502396.2 Tetraspanin 11..167 CDD:459767 22/114 (19%)
tetraspanin_LEL 116..191 CDD:239401
Blue background indicates that the domain is not in the aligned region.

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