DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and tsp-8

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_510445.1 Gene:tsp-8 / 181567 WormBaseID:WBGene00006634 Length:282 Species:Caenorhabditis elegans


Alignment Length:283 Identity:64/283 - (22%)
Similarity:114/283 - (40%) Gaps:73/283 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SCGISMVKYILFIFNLLCSICGILLIVFGA---LLFSKVRNMDDFAEALRT-----QQVPVTMII 58
            || ::.::.:.|:||....:.|:  :|||.   |||....:  ||.....|     :.|...::.
 Worm     3 SC-VNALRIVTFLFNFAFWLSGV--VVFGLGIWLLFDPAAS--DFFALHSTHPGAFRYVGWFLVG 62

  Fly    59 LGTIILLISWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKD---KYLE-IMGDVVE 119
            .|.||:|:.:|||.||.:.:.|....:..:|.:....:||..:.::.:::   .|:| .|.|.:.
 Worm    63 AGAIIILVGYFGCIGAWKMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHYVESSMYDTIR 127

  Fly   120 KAWNHRTSRSDYMDAIQISMKCCGRSGYTDY----------------------------AY---- 152
            ..::..|:..|..|.:|...:|||...|||:                            |:    
 Worm   128 NRYSSETAFKDAFDTVQEKFECCGVKTYTDWLSARWDAEPSTQLEVNEEDAGRIEHGIGAFGGNK 192

  Fly   153 ---QGKFPPSCCSD------TNNC-----------RWETVYRRGCKVTFVEFWDRNSDIIKYAGL 197
               .|:.|.|||::      .|||           ..:.:..|||.....|....:..:|....:
 Worm   193 GTGYGRVPSSCCNEHGKLSYPNNCGRSFSQAPLNTYAQFINTRGCADAVYESVSSSLSLIVGVCV 257

  Fly   198 VIAAIEFVGFVFA----CCLANS 216
            |:..::.:|.|.:    ||..||
 Worm   258 VLCIVQLLGIVLSMTLCCCKGNS 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 60/274 (22%)
tsp-8NP_510445.1 Tetraspanin 8..>151 CDD:459767 36/146 (25%)
tetraspanin_LEL 108..243 CDD:239401 26/134 (19%)

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