DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and tsp-14

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_001367834.1 Gene:tsp-14 / 180761 WormBaseID:WBGene00006640 Length:451 Species:Caenorhabditis elegans


Alignment Length:294 Identity:64/294 - (21%)
Similarity:118/294 - (40%) Gaps:93/294 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEALRTQQV--PVTMI-ILGTIILLISWF 69
            :|:::|:.|.:..:.|:.::..|..||.|     ||.|......:  |..:| |.|..|.::|:|
 Worm    54 LKWLVFLLNSIVFLVGVGILALGVYLFIK-----DFREVKLVDIILNPAILISIFGFSICVVSFF 113

  Fly    70 GCCGAIRESYCMSMTYSILLFV--LMIGQLALVIYMWVQKDKYLEIMGDVVEKAW-------NHR 125
            |..||:|::..:...::..:|:  :::..:.||.:.....|     ..:.:...|       |:.
 Worm   114 GFMGALRDNIFLLKCFAACVFLSYILVVAVTLVFFTLFYTD-----TTEGLSANWLLLYAVKNYH 173

  Fly   126 TSR--SDYMDAIQISMKCCGRS----GYTDYAYQGKF--------------PPSCC--------S 162
            |:|  ::.|||:|.:::|||.|    ||.|:....:|              |.|||        :
 Worm   174 TNRNLAEIMDALQENLECCGVSSIAQGYRDWNMSYQFNCTNSNPQPEKCGVPFSCCRKSVISEAA 238

  Fly   163 DTNN----------CRWET------------VYRRGCKVTFVEFWDRNSDIIKYAGLVIAAIEFV 205
            .::|          | |:.            :|.|||.......::.::   .:.|..:|.: .|
 Worm   239 GSSNPLLPAMRSLEC-WQNALTKRPGDLEHDIYTRGCLQPLRTLFESHA---VHVGAFVALL-IV 298

  Fly   206 GFVFACCLANSI----------------RNYRRR 223
            ....:.||.|.:                ||.|||
 Worm   299 PVCISVCLTNILAKQVDHQRYLLEREARRNDRRR 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 58/268 (22%)
tsp-14NP_001367834.1 Tetraspanin 54..>193 CDD:459767 35/148 (24%)
tetraspanin_LEL 145..286 CDD:351888 30/146 (21%)

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