DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and tsp-9

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_508232.1 Gene:tsp-9 / 180472 WormBaseID:WBGene00006635 Length:233 Species:Caenorhabditis elegans


Alignment Length:224 Identity:51/224 - (22%)
Similarity:79/224 - (35%) Gaps:65/224 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 SNDAFSDFSKVPTTAELERTPSTSQIP-RVGNRKSDKFFGERLADSLSLEQEGQQG-AEVRKQPR 224
            |||.:.||     ..|..|....||.. |.|.::|:            .|.|.:|. .|.:.:..
 Worm   100 SNDLYEDF-----VLESSRRGGFSQDEMRSGEKQSE------------AENEAKQSITENKAKEN 147

  Fly   225 REKSSASSLVRDDVDKIEKFVESTETSAEVKQKPEK--KPTASDEPAAAPEKPEGEEDLMKYIDR 287
            .||.|.:.      .:::|.|...:|...:.:|..|  ||....:.:.:..:.:..|...|.|..
 Worm   148 EEKQSITE------SRVKKSVTEKKTKRIISEKKVKQSKPEKLTKQSTSVNREKQSEVEHKDITM 206

  Fly   288 TVAKDNQIGRRAEFLMAMLEDYNDSVRYEGMEPVEEPLIVPKRRKSKHICDDHDHMHDKLHAHER 352
            |:.|.|...:|      .::.|..| :.|.::.:|           |..|       .:|...|.
 Worm   207 TIEKQNLTEKR------QIQSYQRS-KSENLKVLE-----------KSSC-------GRLKRSET 246

  Fly   353 DASASGVVRTEVSIEQAPRKPSRDFSRYK 381
            ||||.             |..|.|..|||
 Worm   247 DASAE-------------RFDSDDELRYK 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 14/53 (26%)
tsp-9NP_508232.1 Tetraspanin 8..221 CDD:459767 33/149 (22%)

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