DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Ea and LOC1277333

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:XP_316787.2 Gene:LOC1277333 / 1277333 VectorBaseID:AGAMI1_005362 Length:268 Species:Anopheles gambiae


Alignment Length:266 Identity:62/266 - (23%)
Similarity:109/266 - (40%) Gaps:56/266 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SMVKYILFIFNLLCSICGILLIVFG-------ALLFSKVRNMDDFAEALRTQQVPVTMIILGTII 63
            |:|||::.:.|||..:.|.|::...       ..|.|..:|..::...|      ...:::|.::
Mosquito     8 SVVKYLVVLVNLLFWVVGFLIVSLAIWMLSDPTFLISMTQNETNYTIGL------YIFLVVGGLM 66

  Fly    64 LLISWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYLEIMGDVVEKA----WNH 124
            |::::.|||||.:||..|..::...|.::::.:||...:.:...||...::...|::|    :..
Mosquito    67 LVVAFLGCCGAFKESQWMLTSFFCCLLMVLVAELAAGAWAFQNSDKLDNVVRSAVKEAVQTQYGV 131

  Fly   125 RTSRSDYMDAIQISMKCCGRSGYTDY---AYQG-----------------KFPPSCCSDT---NN 166
            ...|:..:||||...||||..|..|:   |:..                 |.|.:||...   ..
Mosquito   132 IPMRTATLDAIQKHYKCCGAEGPNDWQSSAFNNAERPTPSIEISNQPTIYKVPETCCVSNITPEQ 196

  Fly   167 CRWET-------------VYRRGCKVTFVEFWDRNSDIIKYAGLVIAAIEFVGFVFA---CCLAN 215
            |...|             ::..||....|:....|..:|.|.|..|..||.:..:.:   ||...
Mosquito   197 CEKATQMEFLASTKKQPHLFADGCMEKLVQAVQDNIKLICYVGAAIVGIELLTLILSLLLCCAIR 261

  Fly   216 SIRNYR 221
            ...||:
Mosquito   262 RNDNYK 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 59/256 (23%)
LOC1277333XP_316787.2 Tetraspanin 10..>150 CDD:459767 36/145 (25%)
CD151_like_LEL 107..232 CDD:239408 25/124 (20%)

Return to query results.
Submit another query.