DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Ea and LOC1275100

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:XP_314330.2 Gene:LOC1275100 / 1275100 VectorBaseID:AGAMI1_003177 Length:269 Species:Anopheles gambiae


Alignment Length:271 Identity:60/271 - (22%)
Similarity:111/271 - (40%) Gaps:62/271 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CGISMVKYILFIFNLLCSICGILLIVFGA----------LLFSKVRN--MDDFAEALRTQQVPVT 55
            |...:.|.:|.:||.|..:.|.:::..|.          .|...|.|  ::.|.:....:|:...
Mosquito     5 CESCIAKTLLSVFNFLFFVLGTIVLGVGVWLATDKTSFIALLKMVENDQLEHFTQPAVIEQLAYL 69

  Fly    56 MIILGTIILLISWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDK-------YLEI 113
            :|::|:::..:|:.|.|||||||.|:..||.:.|.|:::.::.........||:       ||:.
Mosquito    70 LIVIGSVMFFLSFLGYCGAIRESQCLLTTYGLFLLVILVAEVTAFGLAAAYKDRARTETKNYLQT 134

  Fly   114 ------------MGDVVEKAWNHRTSRSDYMDAIQISMKCCGRSGYTDYAYQGKF---------P 157
                        ..|.|...||:..|          .:.|||...|.|:|...|:         |
Mosquito   135 TISNYYTSNDRNQTDAVTLMWNYMMS----------ELHCCGVDDYRDFALSEKWNESKRDKIIP 189

  Fly   158 PSCCSDTN-------NCRW-----ETVYRRGCKVTFVEFWDRNSDIIKYAGLVIAAIEFVGFVFA 210
            .:||..|:       ||.:     .:.:::||....:::...|.:::....:.:...:.:....:
Mosquito   190 TACCVQTSLFQPQDKNCPFSPTDSNSYFKKGCYNALIDWIMYNRNLVIIVAIGVGLTQLLAIFLS 254

  Fly   211 CCLANSIRNYR 221
            .||..||..||
Mosquito   255 FCLCKSIEKYR 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 55/258 (21%)
LOC1275100XP_314330.2 Tetraspanin 11..259 CDD:459767 55/257 (21%)
tetraspanin_LEL 125..222 CDD:351888 21/106 (20%)

Return to query results.
Submit another query.