DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and Cd9

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_031683.1 Gene:Cd9 / 12527 MGIID:88348 Length:226 Species:Mus musculus


Alignment Length:231 Identity:56/231 - (24%)
Similarity:101/231 - (43%) Gaps:26/231 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GISMVKYILFIFNLLCSICGILLIVFGALL---------FSKVRNMDDFAEALRTQQVPVTMIIL 59
            |...:||:||.||.:..:.||.::..|..|         |.:..|...|...:      ..:|..
Mouse     6 GSKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQENNHSSFYTGV------YILIGA 64

  Fly    60 GTIILLISWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYL----EIMGDVVEK 120
            |.:::|:.:.|||||::||.||...:...|.|:...::|..::.:..||:.:    |...|..:|
Mouse    65 GALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAVWGYTHKDEVIKELQEFYKDTYQK 129

  Fly   121 AWNHRTSRSDYMDAIQISMKCCGRSGYTDYAYQGKFPPSCCSDTNNCRWETVYRRGCKVTFVEFW 185
            ..:....:.:.:.||.:::.|||.:|..:     :|....|....  ..|:...:.|.....|.:
Mouse   130 LRSKDEPQRETLKAIHMALDCCGIAGPLE-----QFISDTCPKKQ--LLESFQVKPCPEAISEVF 187

  Fly   186 DRNSDIIKYAGLVIAAIEFVGFVFACCLANSIRNYR 221
            :....||...|:.||.:...|.:|:..|..:||..|
Mouse   188 NNKFHIIGAVGIGIAVVMIFGMIFSMILCCAIRRSR 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 52/219 (24%)
Cd9NP_031683.1 Tetraspanin 10..217 CDD:459767 52/219 (24%)
CD9_LEL 109..191 CDD:239405 16/88 (18%)

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