DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and Cd63

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_031679.1 Gene:Cd63 / 12512 MGIID:99529 Length:238 Species:Mus musculus


Alignment Length:240 Identity:67/240 - (27%)
Similarity:124/240 - (51%) Gaps:36/240 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GISMVKYILFIFNLLCSICGILLIVFGA---LLFSKVRNMDDFAEALRTQQVPVTMIILGTIILL 65
            |:..||::|::..|....|.:.||..|.   ::..:....:..|.:|    :||.:|.:|..:.|
Mouse     6 GMKCVKFLLYVLLLAFCACAVGLIAIGVAVQVVLKQAITHETTAGSL----LPVVIIAVGAFLFL 66

  Fly    66 ISWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYLEIMGDVVEKAWN--HRTSR 128
            :::.|||||.:|:||:.:|::|.|.::|:.::|:.|..:|.:|:        |:..:|  .:...
Mouse    67 VAFVGCCGACKENYCLMITFAIFLSLIMLVEVAVAIAGYVFRDQ--------VKSEFNKSFQQQM 123

  Fly   129 SDY---------MDAIQISMKCCGRSGYTDY-----AYQGKFPPSCCSDT-----NNCRWETVYR 174
            .:|         :|.:|....|||.|.|||:     ..:.:.|.|||.:.     |:.:..|::.
Mouse   124 QNYLKDNKTATILDKLQKENNCCGASNYTDWENIPGMAKDRVPDSCCINITVGCGNDFKESTIHT 188

  Fly   175 RGCKVTFVEFWDRNSDIIKYAGLVIAAIEFVGFVFACCLANSIRN 219
            :||..|...:..:|..::..|.|.||.:|.:|.:|:|||..|||:
Mouse   189 QGCVETIAIWLRKNILLVAAAALGIAFVEVLGIIFSCCLVKSIRS 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 63/230 (27%)
Cd63NP_031679.1 Tetraspanin 10..229 CDD:459767 63/230 (27%)
CD63_LEL 105..203 CDD:239419 23/105 (22%)
Lysosomal targeting motif. /evidence=ECO:0000269|PubMed:21041449 234..238 67/240 (28%)

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