DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and Cd53

DIOPT Version :9

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_031677.1 Gene:Cd53 / 12508 MGIID:88341 Length:219 Species:Mus musculus


Alignment Length:223 Identity:58/223 - (26%)
Similarity:119/223 - (53%) Gaps:36/223 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ISMVKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEALRTQQVPV-----TMIILGTIIL 64
            :.::||:|||||||..:||..::.||  ::..|:|    ...:..:.:|.     .::|:|:||:
Mouse     6 LKLLKYVLFIFNLLFWVCGCCILGFG--IYFLVQN----TYGVLFRNLPFLTLGNILVIVGSIIM 64

  Fly    65 LISWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYLEIMGDVVEKAWNHRTSRS 129
            ::::.||.|:|:|:.|:.|::.:||.::::.::.:.|.::|.:.|...::.:.:..:..|..|.:
Mouse    65 VVAFLGCMGSIKENKCLLMSFFVLLLIILLAEVTIAILLFVYEQKLNTLVAEGLNDSIQHYHSDN 129

  Fly   130 DYM---DAIQISMKCCGRSGYTDYAYQGKFPPSCC---SDTNNCRWETVYRRGCKVTFVEFWDRN 188
            ..|   |.||..::|||.:|.:|:.   ..|||.|   :|...|     |.:      .:.|..:
Mouse   130 STMKAWDFIQTQLQCCGVNGSSDWT---SGPPSSCPSGADVQGC-----YNK------AKSWFHS 180

  Fly   189 SDIIKYAGLV---IAAIEFVGFVFACCL 213
            :.:  |.|::   :..|:.:|..||..|
Mouse   181 NFL--YIGIITICVCVIQVLGMSFALTL 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspannin 8..217 CDD:278750 58/220 (26%)
tetraspanin_LEL 104..188 CDD:239401 21/89 (24%)
Cd53NP_031677.1 Tetraspannin 9..210 CDD:278750 58/220 (26%)
CD53_like_LEL 104..186 CDD:239417 22/97 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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