DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and Cd53

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_031677.1 Gene:Cd53 / 12508 MGIID:88341 Length:219 Species:Mus musculus


Alignment Length:223 Identity:58/223 - (26%)
Similarity:119/223 - (53%) Gaps:36/223 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ISMVKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEALRTQQVPV-----TMIILGTIIL 64
            :.::||:|||||||..:||..::.||  ::..|:|    ...:..:.:|.     .::|:|:||:
Mouse     6 LKLLKYVLFIFNLLFWVCGCCILGFG--IYFLVQN----TYGVLFRNLPFLTLGNILVIVGSIIM 64

  Fly    65 LISWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYLEIMGDVVEKAWNHRTSRS 129
            ::::.||.|:|:|:.|:.|::.:||.::::.::.:.|.::|.:.|...::.:.:..:..|..|.:
Mouse    65 VVAFLGCMGSIKENKCLLMSFFVLLLIILLAEVTIAILLFVYEQKLNTLVAEGLNDSIQHYHSDN 129

  Fly   130 DYM---DAIQISMKCCGRSGYTDYAYQGKFPPSCC---SDTNNCRWETVYRRGCKVTFVEFWDRN 188
            ..|   |.||..::|||.:|.:|:.   ..|||.|   :|...|     |.:      .:.|..:
Mouse   130 STMKAWDFIQTQLQCCGVNGSSDWT---SGPPSSCPSGADVQGC-----YNK------AKSWFHS 180

  Fly   189 SDIIKYAGLV---IAAIEFVGFVFACCL 213
            :.:  |.|::   :..|:.:|..||..|
Mouse   181 NFL--YIGIITICVCVIQVLGMSFALTL 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 58/220 (26%)
Cd53NP_031677.1 Tetraspanin 9..208 CDD:459767 58/220 (26%)
CD53_like_LEL 104..186 CDD:239417 22/97 (23%)

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