DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and Tsp68C

DIOPT Version :9

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_729926.1 Gene:Tsp68C / 117407 FlyBaseID:FBgn0043550 Length:362 Species:Drosophila melanogaster


Alignment Length:279 Identity:62/279 - (22%)
Similarity:105/279 - (37%) Gaps:81/279 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSCGISMVKYILFIFNLLCSICGILLIVFGALLFSKVRNMDD---------FAEALRTQQVPVTM 56
            |:|..: .|::|.:.|.|..|||:||:|.|..:||     |:         .|.:.|...:|..:
  Fly     1 MACCFN-YKFVLNLCNFLFLICGLLLVVSGLYIFS-----DNKRILLSRLLAASSDRLSSLPQPL 59

  Fly    57 I--------ILGTIILLISWFGCCGAIRESYCMSMTYSILLFVLMIGQ--LALVIYMWVQKDKYL 111
            :        |.|.:..|.:..|...:...:||....|.:.:.||::.:  |.|.|.:|.      
  Fly    60 LFYIALGVAIAGFVATLAAVVGFWASCLHTYCFLTIYFLSVVVLLLTESVLCLAITLWP------ 118

  Fly   112 EIMGDVVEKAWNHRTSRSDY-----------MDAIQISMKCCGRSGYTDY-----AYQG------ 154
            ..:|..:::....|:.:|:|           :|..|:...|||.....||     ..||      
  Fly   119 HCLGISLDETQMVRSLQSNYGVPGQEQFTNALDLAQVRFGCCGMRSSLDYDTSLWRLQGYGQRNW 183

  Fly   155 KFPPSCC--------------SDTNNCRWETVYR---------RGCKVTFVEFWDRNS-DIIKYA 195
            ..|.|||              ...|....:::.|         ..| :..::.|.|.. .|...|
  Fly   184 PVPLSCCFLKNAGHSMAYLDPKPANESMCQSLERLSYERERHTESC-LPHLDNWYREQYSIFLGA 247

  Fly   196 GLVIAAIEF---VGFVFAC 211
            .|::|.|||   :..:.:|
  Fly   248 SLILAMIEFCVLLAIIMSC 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspannin 8..217 CDD:278750 60/272 (22%)
tetraspanin_LEL 104..188 CDD:239401 22/128 (17%)
Tsp68CNP_729926.1 Tetraspannin 8..267 CDD:278750 60/271 (22%)
tetraspanin_LEL 117..241 CDD:239401 23/130 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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