DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and UPK1A

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:XP_054175633.1 Gene:UPK1A / 11045 HGNCID:12577 Length:313 Species:Homo sapiens


Alignment Length:212 Identity:42/212 - (19%)
Similarity:75/212 - (35%) Gaps:78/212 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 AEALRTQQVPVTMIILGTIILLIS----------------------------------W------ 68
            |||.:...|.|.::::|.||:|:|                                  |      
Human     8 AEAEKGSPVVVGLLVVGNIIILLSGLSLFAETIWVTADQYRVYPLMGVSGKDDVFAGAWIAIFCG 72

  Fly    69 --------FGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYLEIMGDVVEKAWNHR 125
                    ||...|:.....|.:||.:|:.::.|.:.|..|..:..:|..:.....:.::.....
Human    73 FSFFMVASFGVGAALCRRRSMVLTYLVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQMLTFY 137

  Fly   126 TSRSD-------YMDAIQISMKCCGRSGYTDY-----AYQG-------KFPPSCCSDTNN----- 166
            ::.:|       ..|.:.|..:|||.||..|:     |::.       .:||.||..|.|     
Human   138 SADTDQGQELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRAATPEVVFPWPPLCCRRTGNFIPLN 202

  Fly   167 ---CR---WETVYRRGC 177
               ||   .:.::.:||
Human   203 EEGCRLGHMDYLFTKGC 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 42/212 (20%)
UPK1AXP_054175633.1 Tetraspanin 25..>163 CDD:459767 21/137 (15%)
uroplakin_I_like_LEL 113..231 CDD:239409 22/107 (21%)

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