DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and tspan2b

DIOPT Version :9

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:XP_005161955.1 Gene:tspan2b / 101883842 ZFINID:ZDB-GENE-100922-60 Length:212 Species:Danio rerio


Alignment Length:226 Identity:65/226 - (28%)
Similarity:110/226 - (48%) Gaps:31/226 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GISMVKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEALRTQQVPVT-------MIILGT 61
            |:..||::|||||.:..:.|.|::..|..|     .:|....:|..:..|.|       :|..|.
Zfish     7 GMKCVKFLLFIFNFIFWLMGSLVLAVGLWL-----RLDPNTVSLLGEDGPDTFFIGVYILIAAGG 66

  Fly    62 IILLISWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYL-EIMGDVVEKAWNHR 125
            :::|:.:||||||:|||.|:...:...|.|:...::|..::.::.|||.: ||.....|.|.|:.
Zfish    67 LVMLVGFFGCCGAVRESQCLLGLFFACLLVIFGAEVAAGVFGFINKDKIIQEIRHFYDESAGNNN 131

  Fly   126 TSRSDYMDAIQISMKCCGRSGYTDYAYQGKFPPSCCSDTNNCRWETVYRRGCKVTFVEFWDRNSD 190
            .:.:  :.:....:.|||.|..|         ||.|.:       .|:.:.|.|...||::....
Zfish   132 NNAT--VQSYHTVLSCCGSSTVT---------PSSCKN-------MVFNQTCDVAIEEFFNSKLF 178

  Fly   191 IIKYAGLVIAAIEFVGFVFACCLANSIRNYR 221
            |:.|.|:.||.:..:|.:|:..|..:|||.|
Zfish   179 IVGYVGIGIAGVMIIGMIFSMVLCCAIRNSR 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspannin 8..217 CDD:278750 60/216 (28%)
tetraspanin_LEL 104..188 CDD:239401 21/84 (25%)
tspan2bXP_005161955.1 Tetraspannin 10..205 CDD:278750 60/217 (28%)
tetraspanin_LEL 109..177 CDD:243179 21/85 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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