DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ea and TSPAN3

DIOPT Version :10

Sequence 1:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_005715.1 Gene:TSPAN3 / 10099 HGNCID:17752 Length:253 Species:Homo sapiens


Alignment Length:229 Identity:65/229 - (28%)
Similarity:108/229 - (47%) Gaps:21/229 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CGISMVKYILFIFNLL-CSICGILLIVFGALLFSKVRNMDDFAEALRTQQVPVTMIILGTIILLI 66
            |||:..|.:|...||: ....|||..| ||.:|....:.|.|.|.:.|....|.:|.:|.::.:|
Human     4 CGITSSKTVLVFLNLIFWGAAGILCYV-GAYVFITYDDYDHFFEDVYTLIPAVVIIAVGALLFII 67

  Fly    67 SWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYLEIMGDVVEKAW-----NHRT 126
            ...|||..||||.|...|:.|:|.::.:.::.:|:..:|.:.|....:...::|.:     .:..
Human    68 GLIGCCATIRESRCGLATFVIILLLVFVTEVVVVVLGYVYRAKVENEVDRSIQKVYKTYNGTNPD 132

  Fly   127 SRSDYMDAIQISMKCCGRSGYTDYAYQGKF--------PPSCCSDT-NNCRW-----ETVYRRGC 177
            :.|..:|.:|..:.|||...|:|:.....|        |.|||.:| :||..     ..:|..||
Human   133 AASRAIDYVQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRETASNCNGSLAHPSDLYAEGC 197

  Fly   178 KVTFVEFWDRNSDIIKYAGLVIAAIEFVGFVFAC 211
            :...|:........:.:|.|..|||:.:|.:.||
Human   198 EALVVKKLQEIMMHVIWAALAFAAIQLLGMLCAC 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 62/224 (28%)
TSPAN3NP_005715.1 Tetraspanin 9..235 CDD:459767 62/224 (28%)
TM4SF8_like_LEL 104..210 CDD:239416 23/105 (22%)

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