DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and tspan10

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:XP_001339579.3 Gene:tspan10 / 799194 ZFINID:ZDB-GENE-041111-201 Length:347 Species:Danio rerio


Alignment Length:250 Identity:54/250 - (21%)
Similarity:107/250 - (42%) Gaps:46/250 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MFKYLLYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFD-GGVNTQTIPICIIVIGSVTFVVAFFG 70
            :.||||...||:|.|.|:..:|:|...|....:|.... .|:.|..: :..:.:|.|..:::..|
Zfish    88 ILKYLLISSNLLFTALGLATLVLGLWGLINKESFAQEKISGIGTDPM-LLFLFLGLVLALLSMTG 151

  Fly    71 CCGTIRENACCTTIYAICMLILFGLQLALSIWIFA----ANDKFLSSMGKAVDKAWDENNAAQGY 131
            |.|.:|||.|...|::..:.:|...|:..::.:|:    ..|.....|..|:.:..|:.:..  :
Zfish   152 CIGALRENMCLLRIFSAAVFLLVVAQVLAAVALFSMQAQMEDYLRLGMLTAIVRYQDDLDLR--F 214

  Fly   132 PMDALQLAFSCCGNTGYQQYET---------------VPSSCCGYKDRTKVCEAEIYSQRPGCRQ 181
            ..|.:|.:..|||...|:.:|.               ||.|||    ...:....:::.:.|...
Zfish   215 ITDEIQTSLQCCGADTYRDWEINVYYNCSAPGVQACGVPPSCC----IDPLENGTVWNSQCGVGA 275

  Fly   182 EFVDFWASNT---------DLIRWS--------SLIIALFELGIFIMSCCLASAM 219
            :.:|.:::.:         .:.||.        :::|.|  |||.|::..:.:.:
Zfish   276 QQLDEFSAQSVIFLGGCLGSVARWMEHNGGVIVTVVIVL--LGIQILTLFITARL 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 54/244 (22%)
tspan10XP_001339579.3 None

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