DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eb and UPK1B

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_008883.2 Gene:UPK1B / 7348 HGNCID:12578 Length:260 Species:Homo sapiens


Alignment Length:199 Identity:38/199 - (19%)
Similarity:64/199 - (32%) Gaps:59/199 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 IVIGSVTFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWI-----FAANDKFLSSMGK 116
            |.:|...|.::..|..|.::.:......|.|.|.|::..::|..|..     |...:.||..|.:
Human    63 IFVGICLFCLSVLGIVGIMKSSRKILLAYFILMFIVYAFEVASCITAATQQDFFTPNLFLKQMLE 127

  Fly   117 AV--------DKAWDENNAAQGYPMDALQLAFSCCGNTG---YQQYETV------------PSSC 158
            ..        |..|..|...:.:  |.|.|..:|||..|   :|:|.:.            |..|
Human   128 RYQNNSPPNNDDQWKNNGVTKTW--DRLMLQDNCCGVNGPSDWQKYTSAFRTENNDADYPWPRQC 190

  Fly   159 CGYKD-----RTKVCEAEI--YSQRPGCRQEFVD---------------------FWASNTDLIR 195
            |...:     ..:.|:..:  :....|| .|.:.                     ||.....:..
Human   191 CVMNNLKEPLNLEACKLGVPGFYHNQGC-YELISGPMNRHAWGVAWFGFAILCWTFWVLLGTMFY 254

  Fly   196 WSSL 199
            ||.:
Human   255 WSRI 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 38/199 (19%)
UPK1BNP_008883.2 Tetraspanin 14..>161 CDD:459767 22/99 (22%)
uroplakin_I_like_LEL 118..230 CDD:239409 22/114 (19%)

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