DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Eb and TSPAN4

DIOPT Version :10

Sequence 1:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001426622.1 Gene:TSPAN4 / 7106 HGNCID:11859 Length:330 Species:Homo sapiens


Alignment Length:167 Identity:47/167 - (28%)
Similarity:77/167 - (46%) Gaps:11/167 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CLSAMFKYLLYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDGGVNTQTIPICIIVIGSVTFVVA 67
            ||.|: |||::..||:|..||..::.||..:.:|.|:|........:.:....:|:.|:....:.
Human    97 CLQAV-KYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIITGAFVMAIG 160

  Fly    68 FFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKF----LSSMGKAVDKAWDENNAA 128
            |.||.|.|:||.|....:.:.:|::|.|:..::|..||..||.    ...:.|.:.....:.|..
Human   161 FVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLKKGLHLYGTQGNVG 225

  Fly   129 QGYPMDALQLAFSCCGNTGYQQY------ETVPSSCC 159
            .......:|..|.|||.:.|..:      ..||.|||
Human   226 LTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCC 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EbNP_724525.1 Tetraspanin 8..216 CDD:459767 44/162 (27%)
TSPAN4NP_001426622.1 None

Return to query results.
Submit another query.